Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848816.1_cds_XP_016510549.1_23374
CDS Infomation

[gene=LOC107827848] [db_xref=GeneID:107827848] [protein=uncharacterized protein LOC107827848] [protein_id=XP_016510549.1] [location=join(37248..38085,38441..38772,40245..41387,41465..41623,41705..42044,42171..42241,42327..42449,43684..44052)] [gbkey=CDS]
Sequence

ATGAAGAGCCGGTCTCACCGGCTTCCTGTTGCGAACCCACAGGATGACTGGGTGGATGGT
TCATGGACAGTGGATTGTGTGTGTGGTGTGAATTTTGATGATGGGGAGGAGATGGTGAAT
TGCGACGAGTGCAGTGTGTGGGTACATACACGTTGCGTGCGCTATGTCAAGAGTGAGAAG
CTGTTTGCGTGTGATAAATGTAAGAATAAGGCCAGGAGGAATGATAGCGAAGAAACTGAG
GTTGCTCAGCTGCTTGTTGAGTTGCCCACCAAGACTATGAGGATGAATCCTCCATATCCT
AATACTGTGCCTATCCGAAAGCCCTTTAGGCTTTGGACTGATTTGCCAATGGAGGAAAGG
GTTCACATGCAAGGTGTTCCGGGTGGTGATCCAGCTTTATTCTCTGGGCTATCATCTGTA
TTTGGTCGTGAATTGTGGAAATGTGGTGGTTATGTTCCCAAAAAGTTTAATTTTCAATAT
AGGGAGTTTCCTTGTTGGGAGAATGAAACAAGGGAGACTCACGATAACACCAGCGACAAA
GGCAATGAGATGACTACTGGTAATGGTGCTGGTGCTTTATTCTCATTGTCAAGAGAAAAC
CGCTTGTTTTCACCAGTAGTTAACCCTGTTTCTGAGAAGCCGGTTATTGAATCTAACGGT
GCTATGGATTCAGATGATGTGAAGAAGGGCACAGGTTTATTGGGCCCCAGCATGATACAA
GGCAGCAAACGTAAAAAAAAAGAGTTTGGGATGTCCAAGGACCAAAGTGGTAAGAAGAAG
TCTAAGATCGTTGAAAAGGAGGCATATCTTAAGAAAGATACTCATGCTTCTAGACCAGAC
AGAGGCCCCATGGCTGTCAAGACAGATATTCAGAGAACAAAATTTGGAAATACAGGGGAA
GTTCTGGCTGCTGTTGGCGTTTTGGAAGGACCTCGTATACTGAACCACGACACAAAAAGC
TACTGTGACATTCCAGCTTCAAGTGAGTGCTTCTCAAAAATTGTATCTTGTGATGTGTCT
AAACGCTGCTCGACAAGTGAAGCACATCCGAGGGAAGACAAGATTAGAAACCATGTTCCT
GCTAGGGTAGAGGATTCTCCTATGGAGAATGATGGAGCAGCAACAATTTTAGAGCGTAGT
GATTCTGCTAGTTTACCTACAACAGACGAGGTTGCTACTAATGCTACCAACAATAAGGAA
GAGGTTGCGGTATGTCTTGGGACTGAATCACAGATGGCGGAGCCCATGATAGAAAATGTT
ACATGTCGTGGTCCAGACATTAAGAGGCACCCAAATATTGAAAGTTCAAGTGATGATAAG
GTCATTTGCTCTTCAGAACTCGATGCTAAATTGACAGCAGAAGTCCATTCTGATCCTGCA
GGCCTTGAATTTCAATATTCACTTTCAAGCAACGGTAAGTTGGATATAACAAAATCCTTG
CCAAAACCTGCAGGGATATCTTCAGGATGCCTGTCTGAAAAAGCTGAAGTAAACATTACC
ACTGTAATCAATTCAGAATATAGTGACTGTAAATTAGAGGAAGACGATAAAAAGGCAACA
ATGGGTGATAATAATATAACTAATACTGATGAATCACCCAGTGCTCTCTGTCAATCTAAT
CAAGAACCTAAGATTGCTGAAGTTGCGGTAGGACCAAGAAAGAGTTCAGGACACAAGGAA
AGTTCAAAACCTGCTGAAGATGCACCTAGATCCTGCTTACCAGTCACAAATCCTTTACCA
GCTTCTAATCACCGTAAAGTAGTTTTATCCATGGGAAAATCATCTACTGGAACAACCAAG
TCTTCTGCTCCTGAGAATCGAACATCCTCAAAAGCTCATAATCATGATTCTAATGGTAGA
CCAAGAGGAATGTCTGAGATTGATCTTAGTAATAAAAGAGAGAGCTCGTCAATGGATTCT
GGTAGGGATGAGGAGAGGCGTGAAAGACCAAAGAAAATATTGAAAGAGCTCCCAAAGTCA
TCAGTTGTTTCGACATCGAAGACCTCGCAGTCGACCAAGCTCTTTCATGCTCCAGTGAAG
CGAACAGTATCAGAAGCAAAGGATTCGGTCCTAAATTCGTCTGCTAAAACATCAGCGGTG
CGTAGCAACCCTGCTGGTTCACACTCTGCAGAGTCTTCTACTTCACTGCAAAGTGAGAGT
GCCTCACATGTACATAATAAAGCTACAGGTACACATTTGACACAGAAAGGTGAAAAGATA
AACCAGCCCAGTTCCCAACCATCTTCTAAAGTGAATACACATCTGATGCATCCTCCATCT
TCGTCATCTCCTGCGGCACTAAGTGATGAAGAGCTTGCTCTACTGCTTCATCAAGAACTT
AATAGTTCTCCTAGAGTTCCTCGAGTGCCACGGATGCGTCATGCTGGTAGCTTACCTCAG
TTAACCTCTCCAACGGGTACAAGTGTGCTAATGAAGCGAACATCTAGTGGTGGAGGAAAA
GATCATGGTTTGACATCTAAAAGAAAGTCAAAGGATATAGGCAAAGATGGTTCAAACTGT
TCCCAGGAAGAGGTGGTTCAGGAAACTAAGATATCCGAGAGATCAATTTCTCCTGATTGT
AGAAGAGAAGATGATTCTGTTATTAAGAGAGAAGGAGATGGTGGATCAGCAAAAACTGTG
CAGTCTCTGAAGAAGAGTAACGTACTTGCCTCCAATGCTTCTGCAAGTAGTAGTTTGTGT
GCCTCAAAAGAGGCAAATAAGCAGAACTTGTCCTCAATGCACTATTCACCAAGTGCAGCT
GCTGCTGATGATTCAAAAGTGGCTGGACATCCTTCACGCCGTACTTTACCAGGCTTGCTT
GCTGAGATTATGAGCAAAGGTCAAAGAATGACTTATGAAGAGCTTTGCAATGCAGTCCTT
CCGCACTGGCCCAACTTGAGGAAGCACAACGGAGAACGTTACGCATATTCAAGTCACTCT
CAGGCTGTTCTTGATTGCTTAAGGAACCGAAGTGAATGGTCTCGCCTGGTTGATCGAGGT
CCCAAGACCAGTACAAGTAGGAAGAGACGCAAGCTTGATGTTGATTCCCAATTTACTGAA
TCAGAGGATAATGAAGATTGCATGGATAGAGCTGCAAAAGATGTCAGGAACCGGGCTTTT
GAATCAAATCAGGAAGAGTTTCCCAAAGGCAAGAGGAAGGCGAGAAAGCGCAGGCGACTG
GCTCTTCAAGGAAGAGGCATAAAGGATGTGAGGAGGCGGCACAAGGCTGAGGTTTCCAGT
GATGAGGAGGTTGCCTCATCCTCTGAATCTCGTGAGGACAGCATTTTCAGCGAAGATGAG
GTACAAGGTGGTGAAACTTCTCCAGCTGGAAATGAGGCCTCTGCTAGCTCTGATGGGAGA
GTGACCATGTCATAA

Peptide Sequence

PEP ID

XP_016510549.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107827848 [Nicotiana tabacum]
Sequence

MKSRSHRLPVANPQDDWVDGSWTVDCVCGVNFDDGEEMVNCDECSVWVHTRCVRYVKSEK
LFACDKCKNKARRNDSEETEVAQLLVELPTKTMRMNPPYPNTVPIRKPFRLWTDLPMEER
VHMQGVPGGDPALFSGLSSVFGRELWKCGGYVPKKFNFQYREFPCWENETRETHDNTSDK
GNEMTTGNGAGALFSLSRENRLFSPVVNPVSEKPVIESNGAMDSDDVKKGTGLLGPSMIQ
GSKRKKKEFGMSKDQSGKKKSKIVEKEAYLKKDTHASRPDRGPMAVKTDIQRTKFGNTGE
VLAAVGVLEGPRILNHDTKSYCDIPASSECFSKIVSCDVSKRCSTSEAHPREDKIRNHVP
ARVEDSPMENDGAATILERSDSASLPTTDEVATNATNNKEEVAVCLGTESQMAEPMIENV
TCRGPDIKRHPNIESSSDDKVICSSELDAKLTAEVHSDPAGLEFQYSLSSNGKLDITKSL
PKPAGISSGCLSEKAEVNITTVINSEYSDCKLEEDDKKATMGDNNITNTDESPSALCQSN
QEPKIAEVAVGPRKSSGHKESSKPAEDAPRSCLPVTNPLPASNHRKVVLSMGKSSTGTTK
SSAPENRTSSKAHNHDSNGRPRGMSEIDLSNKRESSSMDSGRDEERRERPKKILKELPKS
SVVSTSKTSQSTKLFHAPVKRTVSEAKDSVLNSSAKTSAVRSNPAGSHSAESSTSLQSES
ASHVHNKATGTHLTQKGEKINQPSSQPSSKVNTHLMHPPSSSSPAALSDEELALLLHQEL
NSSPRVPRVPRMRHAGSLPQLTSPTGTSVLMKRTSSGGGKDHGLTSKRKSKDIGKDGSNC
SQEEVVQETKISERSISPDCRREDDSVIKREGDGGSAKTVQSLKKSNVLASNASASSSLC
ASKEANKQNLSSMHYSPSAAAADDSKVAGHPSRRTLPGLLAEIMSKGQRMTYEELCNAVL
PHWPNLRKHNGERYAYSSHSQAVLDCLRNRSEWSRLVDRGPKTSTSRKRRKLDVDSQFTE
SEDNEDCMDRAAKDVRNRAFESNQEEFPKGKRKARKRRRLALQGRGIKDVRRRHKAEVSS
DEEVASSSESREDSIFSEDEVQGGETSPAGNEASASSDGRVTMS

Transcript Sequence

Gene sequence data has not been registered.